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hts
develop
HTS
Bam
Aux
AuxValue
BaseMod
Error
Modification
Position
Cigar
Flag
Header
MissingIndexError
Mpileup
InputData
Pileup
Alignment
Column
InputData
QueryError
Record
Bcf
Error
FieldError
Format
FormatDefinitionError
FormatError
FormatReadError
FormatTypeError
FormatUpdateError
Header
HeaderError
IndexError
Info
InfoError
InfoReadError
InfoTypeError
InfoUpdateError
MissingIndexError
OpenError
QueryError
Record
SubsetError
UnknownSampleError
UnsupportedFormatOperationError
UnsupportedInfoOperationError
Bgzf
Error
Faidx
Hts
LibHTS2
Tabix
MissingIndexError
QueryError
class
HTS::
Hts
HTS::Hts
Reference
Object
Direct Known Subclasses
HTS::Bam
HTS::Bcf
HTS::Bgzf
Defined in:
hts/hts.cr
Macro Summary
define_getter
(name)
define_iterator
(name)
Instance Method Summary
#close
#closed?
#file_format
#file_format_version
#rewind
#seek
(offset)
#set_threads
(n)
#tell
#to_unsafe
Macro Detail
macro
define_getter
(name)
#
[
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]
macro
define_iterator
(name)
#
[
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]
Instance Method Detail
def
close
#
[
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]
def
closed?
#
[
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]
def
file_format
#
[
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]
def
file_format_version
#
[
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]
def
rewind
#
[
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]
def
seek
(offset)
#
[
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]
def
set_threads
(n)
#
[
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]
def
tell
#
[
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]
def
to_unsafe
#
[
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]